Transcriptome-wide microRNA target prediction including lncRNAs
miRcode 11 (June 2012) based on: UCSC GRCh37/hg19, GENCODE 11 transcripts, Multiz 46 species, TargetScan6 families
Search | Data info | Browse | Download | FAQ | Larsson lab

Introduction

MiRcode provides "whole transcriptome" human microRNA target predictions based on the comprehensive GENCODE gene annotation, including >10,000 long non-coding RNA genes. Coding genes are also covered, including atypical regions such as 5'UTRs and CDS. MicroRNA family definitions and names are consistent with TargetScan. Site conservation is evaluated based on 46 vertebrates species. Data sources and stats is found on the data info page, and the FAQ answers many questions. Please cite the miRcode paper if this resource is useful in your research.

Do an interactive search below, browse sites in the UCSC browser, or download for local use.

Note that miRcode sites are now directly available through the UCSC browser Track Data Hubs feature.

Target site search

Gene (symbol/accession): MicroRNA family: (Highly conserved families)
Gene class: Any
LncRNA (all)
LncRNA (intergenic)
LncRNA (coding overlap)
Coding
Pseudogene
Other
 Site conservation: Any
Most primates
+Most mammals
+Most non-mammal vertebrates
 Transcript region: Any/ncRNA
3'UTR
CDS
5'UTR



Search result

ENSG00000229807.3 (XIST) (lncRNA, intergenic)
microRNA familySeed positionSeed typeTranscript regionRepeatConservation
PrimatesMammalsOther vert.
miR-503 chrX:73072555 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73062562 7-mer-m8 ncRNA no 56 % 22 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73063618 7-mer-A1 ncRNA no 78 % 22 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73066258 7-mer-A1 ncRNA no 33 % 4 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73066534 7-mer-A1 ncRNA no 22 % 4 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73067819 8-mer ncRNA no 67 % 4 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73067882 7-mer-A1 ncRNA no 67 % 4 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73068314 7-mer-A1 ncRNA no 33 % 4 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73069906 7-mer-A1 ncRNA no 22 % 22 % 0 %
miR-130ac/301ab/301b/301b-3p/454/721/4295/3666 chrX:73071786 7-mer-m8 ncRNA no 56 % 4 % 0 %
miR-132/212/212-3p chrX:73042474 8-mer ncRNA no 67 % 0 % 0 %
miR-132/212/212-3p chrX:73044322 7-mer-A1 ncRNA yes 67 % 35 % 0 %
miR-132/212/212-3p chrX:73045748 7-mer-m8 ncRNA no 11 % 0 % 0 %
miR-132/212/212-3p chrX:73062988 8-mer ncRNA no 78 % 13 % 0 %
miR-132/212/212-3p chrX:73063107 7-mer-A1 ncRNA no 56 % 4 % 0 %
miR-132/212/212-3p chrX:73063655 8-mer ncRNA no 67 % 17 % 0 %
miR-132/212/212-3p chrX:73066660 7-mer-A1 ncRNA no 67 % 9 % 0 %
miR-132/212/212-3p chrX:73067023 8-mer ncRNA no 56 % 17 % 0 %
miR-132/212/212-3p chrX:73067919 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-132/212/212-3p chrX:73068034 8-mer ncRNA no 67 % 17 % 0 %
miR-7/7ab chrX:73043482 8-mer ncRNA no 56 % 0 % 0 %
miR-7/7ab chrX:73062764 7-mer-m8 ncRNA no 67 % 9 % 0 %
miR-7/7ab chrX:73065637 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-7/7ab chrX:73072237 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-133abc chrX:73043652 7-mer-A1 ncRNA no 67 % 17 % 0 %
miR-133abc chrX:73047003 7-mer-A1 ncRNA no 89 % 9 % 0 %
miR-9/9ab chrX:73042802 7-mer-m8 ncRNA no 56 % 4 % 0 %
miR-9/9ab chrX:73044930 7-mer-m8 ncRNA no 33 % 4 % 0 %
miR-9/9ab chrX:73063675 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-93/93a/105/106a/291a-3p/294/295/302abcde/372/373/428/519a/520be/520acd-3p/1378/1420ac chrX:73044509 7-mer-m8 ncRNA no 44 % 0 % 0 %
miR-93/93a/105/106a/291a-3p/294/295/302abcde/372/373/428/519a/520be/520acd-3p/1378/1420ac chrX:73045244 7-mer-m8 ncRNA no 67 % 17 % 0 %
miR-93/93a/105/106a/291a-3p/294/295/302abcde/372/373/428/519a/520be/520acd-3p/1378/1420ac chrX:73048919 7-mer-m8 ncRNA no 89 % 4 % 0 %
miR-93/93a/105/106a/291a-3p/294/295/302abcde/372/373/428/519a/520be/520acd-3p/1378/1420ac chrX:73067315 7-mer-m8 ncRNA yes 56 % 0 % 0 %
miR-96/507/1271 chrX:73042315 7-mer-m8 ncRNA yes 22 % 0 % 0 %
miR-96/507/1271 chrX:73044045 7-mer-m8 ncRNA yes 56 % 13 % 0 %
miR-96/507/1271 chrX:73045808 7-mer-m8 ncRNA no 56 % 17 % 0 %
miR-96/507/1271 chrX:73049042 7-mer-A1 ncRNA no 67 % 13 % 0 %
miR-96/507/1271 chrX:73062055 8-mer ncRNA no 44 % 22 % 0 %
miR-135ab/135a-5p chrX:73040560 7-mer-m8 ncRNA no 67 % 13 % 0 %
miR-135ab/135a-5p chrX:73072547 7-mer-A1 ncRNA no 78 % 13 % 0 %
miR-137/137ab chrX:73042896 8-mer ncRNA no 67 % 30 % 0 %
miR-137/137ab chrX:73068543 7-mer-A1 ncRNA no 67 % 17 % 0 %
miR-138/138ab chrX:73061784 7-mer-A1 ncRNA no 11 % 0 % 0 %
miR-139-5p chrX:73041145 7-mer-m8 ncRNA no 67 % 4 % 0 %
miR-139-5p chrX:73066780 8-mer ncRNA no 56 % 0 % 0 %
miR-140/140-5p/876-3p/1244 chrX:73040844 7-mer-A1 ncRNA no 67 % 26 % 0 %
miR-140/140-5p/876-3p/1244 chrX:73065814 7-mer-m8 ncRNA no 0 % 0 % 0 %
miR-141/200a chrX:73051070 8-mer ncRNA no 89 % 65 % 0 %
miR-141/200a chrX:73062387 7-mer-m8 ncRNA no 67 % 17 % 0 %
miR-141/200a chrX:73063244 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-141/200a chrX:73071302 7-mer-m8 ncRNA no 67 % 30 % 0 %
miR-144 chrX:73040498 7-mer-m8 ncRNA no 44 % 0 % 0 %
miR-144 chrX:73044765 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-144 chrX:73046154 8-mer ncRNA no 56 % 9 % 0 %
miR-144 chrX:73063806 7-mer-m8 ncRNA no 44 % 13 % 0 %
miR-146ac/146b-5p chrX:73046416 7-mer-m8 ncRNA no 67 % 26 % 0 %
miR-148ab-3p/152 chrX:73044312 7-mer-A1 ncRNA yes 78 % 9 % 0 %
miR-148ab-3p/152 chrX:73063181 7-mer-A1 ncRNA no 67 % 4 % 0 %
miR-148ab-3p/152 chrX:73070493 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-148ab-3p/152 chrX:73070498 7-mer-m8 ncRNA no 11 % 0 % 0 %
miR-150/5127 chrX:73067309 7-mer-m8 ncRNA yes 44 % 0 % 0 %
miR-153 chrX:73045159 7-mer-m8 ncRNA no 78 % 26 % 0 %
miR-153 chrX:73066260 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-153 chrX:73066536 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-153 chrX:73067366 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-155 chrX:73045577 7-mer-m8 ncRNA no 78 % 26 % 0 %
miR-155 chrX:73063203 8-mer ncRNA no 33 % 0 % 0 %
miR-155 chrX:73063435 7-mer-A1 ncRNA no 89 % 9 % 0 %
miR-155 chrX:73067962 7-mer-m8 ncRNA no 78 % 9 % 0 %
miR-155 chrX:73068688 7-mer-A1 ncRNA no 44 % 13 % 0 %
miR-155 chrX:73069396 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-15abc/16/16abc/195/322/424/497/1907 chrX:73045091 7-mer-m8 ncRNA no 89 % 22 % 0 %
miR-15abc/16/16abc/195/322/424/497/1907 chrX:73063254 7-mer-m8 ncRNA no 78 % 17 % 0 %
miR-15abc/16/16abc/195/322/424/497/1907 chrX:73066998 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-15abc/16/16abc/195/322/424/497/1907 chrX:73068620 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-15abc/16/16abc/195/322/424/497/1907 chrX:73071755 7-mer-m8 ncRNA no 33 % 30 % 0 %
miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chrX:73042794 8-mer ncRNA no 78 % 22 % 0 %
miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chrX:73062139 7-mer-m8 ncRNA no 44 % 4 % 0 %
miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chrX:73062560 7-mer-m8 ncRNA no 67 % 13 % 0 %
miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chrX:73067314 7-mer-m8 ncRNA yes 56 % 0 % 0 %
miR-17/17-5p/20ab/20b-5p/93/106ab/427/518a-3p/519d chrX:73070200 7-mer-A1 ncRNA no 0 % 0 % 0 %
miR-181abcd/4262 chrX:73045267 7-mer-m8 ncRNA yes 67 % 4 % 0 %
miR-181abcd/4262 chrX:73047760 7-mer-m8 ncRNA no 78 % 43 % 0 %
miR-181abcd/4262 chrX:73047816 7-mer-m8 ncRNA no 89 % 57 % 0 %
miR-181abcd/4262 chrX:73065233 7-mer-m8 ncRNA no 0 % 9 % 0 %
miR-181abcd/4262 chrX:73067690 7-mer-m8 ncRNA no 78 % 0 % 0 %
miR-182 chrX:73049042 7-mer-A1 ncRNA no 67 % 13 % 0 %
miR-182 chrX:73062055 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-182 chrX:73069223 7-mer-m8 ncRNA no 33 % 0 % 0 %
let-7/98/4458/4500 chrX:73040713 8-mer ncRNA no 67 % 13 % 0 %
let-7/98/4458/4500 chrX:73046461 7-mer-m8 ncRNA no 33 % 0 % 0 %
let-7/98/4458/4500 chrX:73047503 7-mer-m8 ncRNA no 67 % 0 % 0 %
let-7/98/4458/4500 chrX:73047522 7-mer-m8 ncRNA no 33 % 22 % 0 %
let-7/98/4458/4500 chrX:73066229 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-18ab/4735-3p chrX:73064221 7-mer-m8 ncRNA no 22 % 0 % 0 %
miR-18ab/4735-3p chrX:73064664 7-mer-m8 ncRNA no 67 % 13 % 0 %
miR-18ab/4735-3p chrX:73064955 7-mer-m8 ncRNA no 44 % 9 % 0 %
miR-18ab/4735-3p chrX:73065545 7-mer-m8 ncRNA no 89 % 9 % 0 %
miR-18ab/4735-3p chrX:73066127 8-mer ncRNA no 67 % 4 % 0 %
miR-190/190ab chrX:73047653 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-191 chrX:73041544 7-mer-m8 ncRNA no 0 % 0 % 0 %
miR-191 chrX:73069551 7-mer-m8 ncRNA no 0 % 0 % 0 %
miR-192/215 chrX:73041492 7-mer-A1 ncRNA no 67 % 65 % 0 %
miR-192/215 chrX:73045461 7-mer-A1 ncRNA yes 44 % 0 % 0 %
miR-192/215 chrX:73050974 7-mer-m8 ncRNA no 78 % 13 % 0 %
miR-193/193b/193a-3p chrX:73046328 7-mer-m8 ncRNA no 56 % 26 % 0 %
miR-194 chrX:73045496 8-mer ncRNA yes 67 % 4 % 0 %
miR-196abc chrX:73046600 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-196abc chrX:73061761 8-mer ncRNA yes 44 % 30 % 0 %
miR-196abc chrX:73063601 7-mer-A1 ncRNA no 67 % 9 % 0 %
miR-196abc chrX:73068702 8-mer ncRNA no 33 % 4 % 0 %
miR-196abc chrX:73068939 7-mer-m8 ncRNA no 44 % 9 % 0 %
miR-19ab chrX:73067820 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-19ab chrX:73068395 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-19ab chrX:73068452 8-mer ncRNA no 33 % 13 % 0 %
miR-1ab/206/613 chrX:73065803 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-1ab/206/613 chrX:73066375 7-mer-A1 ncRNA no 44 % 9 % 0 %
miR-200bc/429/548a chrX:73041325 7-mer-A1 ncRNA no 22 % 0 % 0 %
miR-200bc/429/548a chrX:73045062 7-mer-m8 ncRNA no 67 % 48 % 0 %
miR-200bc/429/548a chrX:73046342 8-mer ncRNA no 67 % 4 % 0 %
miR-200bc/429/548a chrX:73047281 8-mer ncRNA no 56 % 0 % 0 %
miR-203 chrX:73043242 7-mer-A1 ncRNA no 11 % 0 % 0 %
miR-203 chrX:73061474 7-mer-A1 ncRNA no 89 % 35 % 0 %
miR-203 chrX:73061706 7-mer-A1 ncRNA yes 33 % 30 % 0 %
miR-203 chrX:73067503 8-mer ncRNA no 33 % 0 % 0 %
miR-203 chrX:73067521 7-mer-A1 ncRNA no 22 % 0 % 0 %
miR-203 chrX:73069816 7-mer-A1 ncRNA no 11 % 9 % 0 %
miR-204/204b/211 chrX:73067620 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-204/204b/211 chrX:73068414 7-mer-m8 ncRNA no 44 % 0 % 0 %
miR-205/205ab chrX:73041501 7-mer-A1 ncRNA no 78 % 26 % 0 %
miR-205/205ab chrX:73048968 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-205/205ab chrX:73066616 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-208ab/208ab-3p chrX:73041448 7-mer-A1 ncRNA no 22 % 22 % 0 %
miR-208ab/208ab-3p chrX:73046736 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-208ab/208ab-3p chrX:73070251 7-mer-A1 ncRNA no 56 % 4 % 0 %
miR-21/590-5p chrX:73043927 8-mer ncRNA no 11 % 0 % 0 %
miR-21/590-5p chrX:73044459 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-21/590-5p chrX:73071692 7-mer-A1 ncRNA no 56 % 4 % 0 %
miR-214/761/3619-5p chrX:73043917 7-mer-A1 ncRNA no 56 % 22 % 0 %
miR-214/761/3619-5p chrX:73045419 7-mer-m8 ncRNA yes 67 % 9 % 0 %
miR-214/761/3619-5p chrX:73063016 7-mer-A1 ncRNA no 56 % 22 % 0 %
miR-214/761/3619-5p chrX:73063253 7-mer-A1 ncRNA no 78 % 26 % 0 %
miR-214/761/3619-5p chrX:73068619 7-mer-A1 ncRNA no 56 % 4 % 0 %
miR-214/761/3619-5p chrX:73069046 7-mer-m8 ncRNA no 56 % 17 % 0 %
miR-214/761/3619-5p chrX:73071754 7-mer-A1 ncRNA no 78 % 9 % 0 %
miR-214/761/3619-5p chrX:73072058 8-mer ncRNA no 78 % 30 % 0 %
miR-216a chrX:73043161 8-mer ncRNA no 78 % 17 % 0 %
miR-216a chrX:73068933 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-216b/216b-5p chrX:73043161 7-mer-A1 ncRNA no 44 % 17 % 0 %
miR-217 chrX:73041403 7-mer-m8 ncRNA no 67 % 26 % 0 %
miR-217 chrX:73045065 8-mer ncRNA no 67 % 4 % 0 %
miR-217 chrX:73045614 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-217 chrX:73046982 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-217 chrX:73061693 7-mer-A1 ncRNA yes 33 % 0 % 0 %
miR-217 chrX:73064040 7-mer-A1 ncRNA no 67 % 4 % 0 %
miR-217 chrX:73064296 7-mer-A1 ncRNA no 78 % 9 % 0 %
miR-217 chrX:73064590 7-mer-A1 ncRNA no 67 % 9 % 0 %
miR-217 chrX:73064881 7-mer-A1 ncRNA no 56 % 9 % 0 %
miR-217 chrX:73065171 7-mer-A1 ncRNA no 44 % 13 % 0 %
miR-217 chrX:73065461 7-mer-A1 ncRNA no 67 % 4 % 0 %
miR-217 chrX:73065765 7-mer-A1 ncRNA no 67 % 4 % 0 %
miR-217 chrX:73066053 7-mer-A1 ncRNA no 56 % 9 % 0 %
miR-219-5p/508/508-3p/4782-3p chrX:73044668 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-219-5p/508/508-3p/4782-3p chrX:73064408 8-mer ncRNA no 56 % 0 % 0 %
miR-219-5p/508/508-3p/4782-3p chrX:73065283 8-mer ncRNA no 56 % 0 % 0 %
miR-219-5p/508/508-3p/4782-3p chrX:73065583 8-mer ncRNA no 44 % 0 % 0 %
miR-219-5p/508/508-3p/4782-3p chrX:73065875 8-mer ncRNA no 44 % 0 % 0 %
miR-22/22-3p chrX:73062686 7-mer-A1 ncRNA no 11 % 0 % 0 %
miR-221/222/222ab/1928 chrX:73070011 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-223 chrX:73043292 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-122/122a/1352 chrX:73064433 7-mer-A1 ncRNA no 56 % 4 % 0 %
miR-122/122a/1352 chrX:73065061 8-mer ncRNA no 22 % 0 % 0 %
miR-122/122a/1352 chrX:73065307 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-122/122a/1352 chrX:73065943 8-mer ncRNA no 22 % 0 % 0 %
miR-122/122a/1352 chrX:73066191 7-mer-A1 ncRNA no 33 % 4 % 0 %
miR-23abc/23b-3p chrX:73040650 7-mer-A1 ncRNA no 78 % 26 % 0 %
miR-23abc/23b-3p chrX:73044332 7-mer-A1 ncRNA yes 67 % 22 % 0 %
miR-23abc/23b-3p chrX:73046051 8-mer ncRNA no 56 % 0 % 0 %
miR-23abc/23b-3p chrX:73063100 8-mer ncRNA no 56 % 22 % 0 %
miR-23abc/23b-3p chrX:73063881 8-mer ncRNA no 33 % 4 % 0 %
miR-23abc/23b-3p chrX:73066369 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-23abc/23b-3p chrX:73067803 8-mer ncRNA no 67 % 4 % 0 %
miR-24/24ab/24-3p chrX:73041933 7-mer-A1 ncRNA no 56 % 13 % 0 %
miR-24/24ab/24-3p chrX:73045438 7-mer-A1 ncRNA yes 56 % 9 % 0 %
miR-24/24ab/24-3p chrX:73046320 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-25/32/92abc/363/363-3p/367 chrX:73063643 7-mer-m8 ncRNA no 44 % 9 % 0 %
miR-25/32/92abc/363/363-3p/367 chrX:73066337 7-mer-A1 ncRNA no 22 % 0 % 0 %
miR-25/32/92abc/363/363-3p/367 chrX:73068544 8-mer ncRNA no 67 % 13 % 0 %
miR-26ab/1297/4465 chrX:73069868 7-mer-A1 ncRNA no 44 % 9 % 0 %
miR-27abc/27a-3p chrX:73045230 7-mer-m8 ncRNA no 44 % 0 % 0 %
miR-27abc/27a-3p chrX:73047480 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-101/101ab chrX:73044765 8-mer ncRNA no 78 % 35 % 0 %
miR-101/101ab chrX:73046154 7-mer-A1 ncRNA no 56 % 4 % 0 %
miR-101/101ab chrX:73063108 7-mer-m8 ncRNA no 56 % 0 % 0 %
miR-101/101ab chrX:73067920 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-101/101ab chrX:73069270 7-mer-m8 ncRNA no 44 % 4 % 0 %
miR-29abcd chrX:73044197 7-mer-m8 ncRNA no 100 % 17 % 0 %
miR-29abcd chrX:73044943 7-mer-A1 ncRNA yes 33 % 4 % 0 %
miR-29abcd chrX:73067948 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-30abcdef/30abe-5p/384-5p chrX:73040979 7-mer-m8 ncRNA no 22 % 0 % 0 %
miR-30abcdef/30abe-5p/384-5p chrX:73046446 8-mer ncRNA no 56 % 0 % 0 %
miR-30abcdef/30abe-5p/384-5p chrX:73069949 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-31 chrX:73062272 7-mer-m8 ncRNA no 67 % 17 % 0 %
miR-31 chrX:73071194 7-mer-m8 ncRNA no 67 % 4 % 0 %
miR-103a/107/107ab chrX:73069909 8-mer ncRNA no 33 % 35 % 0 %
miR-103a/107/107ab chrX:73070975 7-mer-A1 ncRNA no 33 % 4 % 0 %
miR-103a/107/107ab chrX:73072553 7-mer-A1 ncRNA no 78 % 4 % 0 %
miR-124/124ab/506 chrX:73047710 7-mer-m8 ncRNA no 78 % 4 % 0 %
miR-124/124ab/506 chrX:73066851 7-mer-m8 ncRNA no 56 % 13 % 0 %
miR-338/338-3p chrX:73044948 7-mer-m8 ncRNA yes 44 % 0 % 0 %
miR-338/338-3p chrX:73067614 8-mer ncRNA no 67 % 4 % 0 %
miR-338/338-3p chrX:73070337 7-mer-m8 ncRNA no 67 % 26 % 0 %
miR-338/338-3p chrX:73070680 7-mer-A1 ncRNA no 78 % 22 % 0 %
miR-338/338-3p chrX:73070983 7-mer-A1 ncRNA no 78 % 9 % 0 %
miR-33a-3p/365/365-3p chrX:73043303 8-mer ncRNA no 56 % 4 % 0 %
miR-33ab/33-5p chrX:73043130 7-mer-A1 ncRNA no 22 % 0 % 0 %
miR-33ab/33-5p chrX:73045311 7-mer-A1 ncRNA yes 67 % 0 % 0 %
miR-33ab/33-5p chrX:73063430 7-mer-A1 ncRNA no 89 % 9 % 0 %
miR-33ab/33-5p chrX:73068114 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-34ac/34bc-5p/449abc/449c-5p chrX:73041850 7-mer-m8 ncRNA no 78 % 22 % 0 %
miR-34ac/34bc-5p/449abc/449c-5p chrX:73043942 7-mer-A1 ncRNA yes 56 % 17 % 0 %
miR-34ac/34bc-5p/449abc/449c-5p chrX:73067282 7-mer-A1 ncRNA yes 22 % 0 % 0 %
miR-375 chrX:73042759 7-mer-A1 ncRNA no 56 % 13 % 0 %
miR-375 chrX:73044905 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-375 chrX:73069024 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-383 chrX:73041389 7-mer-A1 ncRNA no 67 % 4 % 0 %
miR-383 chrX:73063178 7-mer-A1 ncRNA no 78 % 26 % 0 %
miR-383 chrX:73063683 7-mer-A1 ncRNA no 44 % 17 % 0 %
miR-383 chrX:73064278 7-mer-A1 ncRNA no 67 % 9 % 0 %
miR-383 chrX:73065153 7-mer-A1 ncRNA no 56 % 0 % 0 %
miR-383 chrX:73065747 7-mer-A1 ncRNA no 67 % 9 % 0 %
miR-383 chrX:73066035 7-mer-A1 ncRNA no 78 % 9 % 0 %
miR-383 chrX:73067787 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-383 chrX:73068376 7-mer-A1 ncRNA no 56 % 9 % 0 %
miR-383 chrX:73071751 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-425/425-5p/489 chrX:73041239 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-425/425-5p/489 chrX:73047120 7-mer-m8 ncRNA no 33 % 4 % 0 %
miR-425/425-5p/489 chrX:73062785 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-425/425-5p/489 chrX:73063324 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-425/425-5p/489 chrX:73069111 7-mer-A1 ncRNA no 56 % 17 % 0 %
miR-425/425-5p/489 chrX:73071104 7-mer-A1 ncRNA no 33 % 0 % 0 %
miR-125a-5p/125b-5p/351/670/4319 chrX:73043024 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-125a-5p/125b-5p/351/670/4319 chrX:73061280 8-mer ncRNA no 78 % 35 % 0 %
miR-126-3p chrX:73069441 7-mer-m8 ncRNA no 33 % 0 % 0 %
miR-10abc/10a-5p chrX:73061416 7-mer-m8 ncRNA no 78 % 22 % 0 %
miR-10abc/10a-5p chrX:73063692 7-mer-m8 ncRNA no 0 % 0 % 0 %
miR-128/128ab chrX:73045231 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-128/128ab chrX:73047481 7-mer-A1 ncRNA no 67 % 0 % 0 %
miR-129-5p/129ab-5p chrX:73042434 7-mer-A1 ncRNA no 67 % 17 % 0 %
miR-129-5p/129ab-5p chrX:73043502 8-mer ncRNA no 56 % 0 % 0 %
miR-129-5p/129ab-5p chrX:73044902 7-mer-A1 ncRNA no 44 % 0 % 0 %
miR-490-3p chrX:73041426 7-mer-m8 ncRNA no 22 % 0 % 0 %
miR-490-3p chrX:73064519 7-mer-m8 ncRNA no 67 % 0 % 0 %
miR-499-5p chrX:73041448 7-mer-A1 ncRNA no 22 % 22 % 0 %
miR-499-5p chrX:73046736 8-mer ncRNA no 44 % 0 % 0 %
miR-499-5p chrX:73070251 8-mer ncRNA no 56 % 9 % 0 %

256 matching sites.
Inquiries can be addressed to erik.larsson@gu.se